SRA | SRA628138 |
SRS | SRS2659249 |
SRR | SRR6253545 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | NextSeq 500 |
Full-length mRNA-seq | No |
Number of cells | 2,293 |
Number of exp. genes | 21,150 (median number of expressed genes per cell=1958) |
Number of clusters | 11 |
Tissue | Intestinal organoid epithelial cells |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | No |
Target cell population | |
Metadata (raw) | source_name=Intestinal organoid epithelial cells|strain=C57BL/6|treatment=treated with 20ng/ml IL-13|genotype=Wild-type|;GSM2839421: CytoOrgs_IL13_Rep2; Mus musculus; RNA-Seq |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Enterocytes, Enteroendocrine cells, Paneth cells, Tuft cells, Unknown list all |