Intestinal organoid epithelial cells
SRA SRA628138
SRS SRS2659249
SRR SRR6253545
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 2,293
Number of exp. genes 21,150 (median number of expressed genes per cell=1958)
Number of clusters 7
Tissue Intestinal organoid epithelial cells
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Intestinal organoid epithelial cells|strain=C57BL/6|treatment=treated with 20ng/ml IL-13|genotype=Wild-type|;GSM2839421: CytoOrgs_IL13_Rep2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 10.2 Mb)
Cell clustering results
Putative cell types Enterocytes, Tuft cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.