Peripheral blood mononuclear cells
SRA SRA628550
SRS 2244 records (too many to list)
SRR notused
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol Smart-seq2
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq Yes
Number of cells 2,243
Number of exp. genes 40,026 (median number of expressed genes per cell=2122)
Number of clusters
Tissue Peripheral blood mononuclear cells
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Subject6_DENV positive_PBMC_TEMRA|subject id=Subject6|dengue infections history=DENV positive|cell type=PBMC|cell subtype surface markers=CD3+CD4+CD8α/CD14/CD19-CD45RA+CCR7-|cell subtype=TEMRA|;GSM2842083: Single-cell_RNA-seq_Subject6_TEMRA_Cell079; Homo sapiens; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 17.5 Mb)
data download (RPKM, R sparse data object, 47.3 Mb)
Cell clustering results
Putative cell types T cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.