SRA | SRA631205 |
SRS | SRS2690037 |
SRR | SRR6294796 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina HiSeq 2500 |
Full-length mRNA-seq | No |
Number of cells | 3,193 |
Number of exp. genes | 23,494 (median number of expressed genes per cell=1868) |
Number of clusters | 15 |
Tissue | Pulmonary alveolar type i cells |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | No |
Target cell population | |
Metadata (raw) | source_name=alveolar type I (AT1)|cell type=RFP+Pdpn+GFP-CD45- cells from tamoxifen treated Sftpc-CreER; Rosa26-Zsgreen; Hopx-RFP mice|age=postnatal day 15 (P15)|strain=mixed FVB/C57BL6|;GSM2858340: AT1_P15; Mus musculus; RNA-Seq |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Endothelial cells, Ependymal cells, Fibroblasts, Mesothelial cells, Myofibroblasts, Pulmonary alveolar type I cells, Pulmonary alveolar type II cells, Unknown list all |