Pulmonary alveolar type i cells
SRA SRA631205
SRS SRS2690037
SRR SRR6294796
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 3,193
Number of exp. genes 23,494 (median number of expressed genes per cell=1868)
Number of clusters 10
Tissue Pulmonary alveolar type i cells
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=alveolar type I (AT1)|cell type=RFP+Pdpn+GFP-CD45- cells from tamoxifen treated Sftpc-CreER; Rosa26-Zsgreen; Hopx-RFP mice|age=postnatal day 15 (P15)|strain=mixed FVB/C57BL6|;GSM2858340: AT1_P15; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 15.6 Mb)
Cell clustering results
Putative cell types Endothelial cells, Pulmonary alveolar type I cells, Pulmonary alveolar type II cells, Smooth muscle cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.