Pulmonary alveolar type i cells
SRA SRA631205
SRS SRS2690038
SRR SRR6294797
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,409
Number of exp. genes 22,811 (median number of expressed genes per cell=2082)
Number of clusters 5
Tissue Pulmonary alveolar type i cells
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=alveolar type I (AT1)|cell type=RFP+Pdpn+GFP-CD45- cells from tamoxifen treated Sftpc-CreER; Rosa26-Zsgreen; Hopx-RFP mice|age=postnatal day 60 (P60)|strain=mixed FVB/C57BL6|;GSM2858341: AT1_P60; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 7.9 Mb)
Cell clustering results
Putative cell types Pulmonary alveolar type I cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.