SRA SRA631822
SRS SRS2702616
SRR SRR6307232
Species Mus musculus
Sample (strain, genotype, etc.) CD1
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,617
Number of exp. genes 23,337 (median number of expressed genes per cell=1411)
Number of clusters 9
Tissue Brain
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population embryonic cortex
Metadata (raw) source_name=Brain|tissue=embryonic cortex|embryonic age=E13.5|strain=Wildtype CD1|tissue=Brain|;GSM2861511: E13_5; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 9.5 Mb)
Cell clustering results
Putative cell types Cajal-Retzius cells, Epithelial cells, Erythroid-like and erythroid precursor cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.