Ovarian tumor
SRA SRA634975
SRS SRS2724912
SRR SRR6334447
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor Yes
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 2,139
Number of exp. genes 24,574 (median number of expressed genes per cell=2099)
Number of clusters 6
Tissue Ovarian tumor
Cell line (Y/N) Yes
Primary adult tissue (Y/N) No
Target cell population CAOV3
Metadata (raw) isolate=NA|age=NA|biomaterial_provider=ATCC|sex=female|tissue=High Grade Serous Ovarian Tumor|cell_line=CAOV3|treatment=CBDCA_10uM|cloneID=R14|doublings=41|BioSampleModel=Human|;R14_step10_scRNAseq
Gene search
Download Count matrix (raw read counts, R sparse data object, 10.3 Mb)
Cell clustering results
Putative cell types Basal cells, Epithelial cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.