Embryonic stem cell
SRA SRA635094
SRS SRS2976477
SRR SRR6745455
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol C1 Fluidigm
Instrument Illumina HiSeq 2000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq Yes
Number of cells 532
Number of exp. genes 20,605 (median number of expressed genes per cell=2320)
Number of clusters 1
Tissue Embryonic stem cell
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Naive-like H1|cell type=Reset HPSCs|culture media=RSeTTM media|;GSM3015987: single naive H1; Homo sapiens; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 3.6 Mb)
data download (RPKM, R sparse data object, 12.9 Mb)
Cell clustering results
Putative cell types Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.