Whole kidney
SRA SRA635314
SRS SRS2727268
SRR SRR6337221,SRR6337222,SRR6337223,SRR6337224,SRR6337225,SRR6337226,SRR6337227,SRR6337228
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,118
Number of exp. genes 22,486 (median number of expressed genes per cell=807)
Number of clusters 13
Tissue Whole kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=whole kidney tissue|strain=C57BL/6|tissue=adult kidney|age=4-8 weeks|genotype=WT|;GSM2871709: normal4; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 16.1 Mb)
Cell clustering results
Putative cell types Distal tubule cells, Intercalated cells, Loop of Henle cells, Monocytes, NK cells, Principal cells, Proximal tubule cells, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.