Whole kidney
SRA SRA635314
SRS SRS2727269
SRR SRR6337229
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 10,665
Number of exp. genes 24,694 (median number of expressed genes per cell=890)
Number of clusters 18
Tissue Whole kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=whole kidney tissue|strain=C57BL/6|tissue=adult kidney|age=4-8 weeks|genotype=Cdh16CremTmG|;GSM2871710: Ksp-cre-GFP; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 33.6 Mb)
Cell clustering results
Putative cell types Distal tubule cells, Intercalated cells, Loop of Henle cells, Monocytes, Podocytes, Principal cells, Proximal tubule cells, T memory cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.