Lsk cells from bone marrow
SRA SRA636127
SRS SRS2736129
SRR SRR6348974
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 8,202
Number of exp. genes 26,634 (median number of expressed genes per cell=2778)
Number of clusters 12
Tissue Lsk cells from bone marrow
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Lin_negative_cKit_positive_sample_4|tissue=bone marrow|cell type=Lin-cKit+|strain=WT bl6 mice (pool 6 mice)|genotype=WT|;GSM2877130: SIGAF1; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 56.5 Mb)
Cell clustering results
Putative cell types Erythroid-like and erythroid precursor cells, Hematopoietic stem cells, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.