Bone marrow
SRA SRA636127
SRS SRS2736130
SRR SRR6348977
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 8,745
Number of exp. genes 25,458 (median number of expressed genes per cell=3021)
Number of clusters 11
Tissue Bone marrow
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population Lin-cKit+
Metadata (raw) source_name=Lin_negative_cKit_positive_sample_39|tissue=bone marrow|cell type=Lin-cKit+|strain=C57BL/6J*^*KitW-41J/J|genotype=Kit mutant (W41/W41)|;GSM2877133: SIGAG8; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 59.8 Mb)
Cell clustering results
Putative cell types Erythroid-like and erythroid precursor cells, Hematopoietic stem cells, Megakaryocytes, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.