Thymus
SRA SRA637296
SRS SRS2749443
SRR SRR6365752
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,388
Number of exp. genes 22,230 (median number of expressed genes per cell=1339)
Number of clusters 5
Tissue Thymus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Rag1KO_wholeThy_1|background strain=C57BL6/J|genotype=B6.129S7-Rag1 tm1Mom/J|tissue=thymus|developmental day=E16.5|rbc lysis buffer=eBioscience Cat# 00-4333-57|treatment=NA|;GSM2883203: Rag1KO_wholeThy_1; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 6.9 Mb)
Cell clustering results
Putative cell types T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.