Thymus
SRA SRA637296
SRS SRS2749451
SRR SRR6365734
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 315
Number of exp. genes 22,193 (median number of expressed genes per cell=3049)
Number of clusters 3
Tissue Thymus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=E12_5_wholeThy_venus_2|background strain=C57BL6/J|genotype=Pax9VENUS|tissue=thymus|developmental day=E12.5|rbc lysis buffer=none|treatment=NA|;GSM2883185: E12_5_wholeThy_venus_2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 5.2 Mb)
Cell clustering results
Putative cell types Fibroblasts (kidney), Hematopoietic stem cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.