Small intestine
SRA SRA638923
SRS SRS2797113
SRR SRR6954573
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol microwell-seq
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 470
Number of exp. genes 13,215 (median number of expressed genes per cell=795)
Number of clusters 4
Tissue Small intestine
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=SmallIntestine|tissue=SmallIntestine|age=6-10 week-old|gender=female|
Gene search
Download Count matrix (raw read counts, R sparse data object, 2.5 Mb)
Cell clustering results
Putative cell types Enterocytes, Paneth cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.