Bone marrow
| SRA | SRA645056 |
| SRS | SRS2819412 |
| SRR | SRR6450451 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Full-length mRNA-seq | No |
| Number of cells | 1,000 |
| Number of exp. genes | 24,686 (median number of expressed genes per cell=1849) |
| Number of clusters | 19 |
| Tissue | Bone marrow |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Col2.3-cre;LoxP-tdTomato|treatment=N/A|source=bone marrow|cell type=non-hematopoietic Col2.3+|age=16 weeks|;GSM2915575: niche-col23; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | B cells, Endothelial cells, Erythroid-like and erythroid precursor cells, Fibroblasts, Osteoblasts, Plasmacytoid dendritic cells, Schwann cells, Smooth muscle cells, T cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.