Human embryo forebrain
SRA SRA646572
SRS SRS2833946
SRR SRR6470907
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 6,943
Number of exp. genes 34,105 (median number of expressed genes per cell=2040)
Number of clusters 21
Tissue Human embryo forebrain
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) isolate=embryo|age=Week 10|biomaterial_provider=Goncalo Castelo-Branco, MBB, Karolisnak Insitutet, Stockholm, Sweden|sex=missing|tissue=forebrain|Replicate=Subsampling 1|BioSampleModel=Human|;RNA-seq of human embryo forebrain
Gene search
Download Count matrix (raw read counts, R sparse data object, 37.2 Mb)
Cell clustering results
Putative cell types Epithelial cells, Erythroid-like and erythroid precursor cells, Macrophages, Neurons, Pericytes, Plasmacytoid dendritic cells, Radial glia cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.