Embryonic kidney
SRA SRA650986
SRS SRS2859162
SRR SRR6502222
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 6,278
Number of exp. genes 28,992 (median number of expressed genes per cell=1256)
Number of clusters 15
Tissue Embryonic kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=kidney|age=E14.5|genotype/variation=Hoxa9,10,11 and Hoxd9,10,11 -/-|strain=mixed, mostly CD-1 and 129|;GSM2942389: Dropseq E14.5 mutant2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 43.7 Mb)
Cell clustering results
Putative cell types Endothelial cells, Endothelial cells (heart), Erythroid-like and erythroid precursor cells, Fibroblasts (bone), Fibroblasts (kidney), Macrophages, Neurons, Principal cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.