Lateral geniculate nucleus
SRA SRA652149
SRS SRS2862117
SRR SRR6510859,SRR6510864,SRR6510868,SRR6510872,SRR6510876,SRR6510880
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol inDrops
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 18,139
Number of exp. genes 35,260 (median number of expressed genes per cell=1437)
Number of clusters 16
Tissue Lateral geniculate nucleus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=C57Bl6/J|age=P5-P21|sex=pooled male and female|tissue=Lateral geniculate nucleus|biomaterial_provider=Jackson Labs|BioSampleModel=Model organism or animal|;ssRNA-seq of LGN
Gene search
Download Count matrix (raw read counts, R sparse data object, 185.7 Mb)
Cell clustering results
Putative cell types Interneurons, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.