SRA SRA653146
SRS SRS2874272
SRR SRR6542129,SRR6542130,SRR6542131,SRR6542132,SRR6542133,SRR6542134,SRR6542135,SRR6542136,SRR6542137,SRR6542138,SRR6542139,SRR6542140,SRR6542141,SRR6542142,SRR6542143,SRR6542144,SRR6542145,SRR6542146,SR
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol SMART-seq2
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq Yes
Number of cells 6,291
Number of exp. genes 47,513 (median number of expressed genes per cell=4324)
Number of clusters 23
Tissue Colon
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Colon|tissue=Colon|age=3 months|;GSM2967048: Colon; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
RPKM: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Enterocytes, Enteroendocrine cells, Epithelial cells, Goblet cells, Tuft cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.