Tumor
SRA SRA658915
SRS SRS2944109
SRR SRR6710648
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor Yes
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 993
Number of exp. genes 16,111 (median number of expressed genes per cell=519)
Number of clusters 5
Tissue Tumor
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=tumor|treatment=hFc.72hr|tissue=COLO205 tumor|strain=CB.17/SCID (Taconic)|tissue=tumor|age=adult|genotype=WT|gender=male|;GSM2994880: colo205.xenograft.hFc.72hr.mm10; Homo sapiens; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 2.8 Mb)
Cell clustering results
Putative cell types Fibroblasts, Oval cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.