T cells
SRA SRA661260
SRS SRS2991907
SRR SRR6763782
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 612
Number of exp. genes 16,522 (median number of expressed genes per cell=1250)
Number of clusters 3
Tissue T cells
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=CD4_IL10|strain background=C57BL/6|genotype/variation=10BiT IL-21-tRFP|time point=day 16 p.i. with LCMV Cl13|cell type=CD4 T cell|cell subset=CD4+ CD44hi GP66:I-Ab+ Thy1.1+ (IL10+)|;GSM3020587: IL-10-producing CD4 T cells; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 2.0 Mb)
Cell clustering results
Putative cell types T memory cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.