Kidney
SRA SRA662115
SRS SRS2998545
SRR SRR6782101,SRR6782102
Species Mus musculus
Sample (strain, genotype, etc.) CD1
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 2,455
Number of exp. genes 21,350 (median number of expressed genes per cell=909)
Number of clusters 7
Tissue Kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population Glomeruli
Metadata (raw) source_name=Drop-seq of whole isolated glomeruli|developmental stage=8 week old males|tissue type=dissociated glomerular cells|strain=CD1 IGS outbred|fixation=80% methanol/PBS|;GSM3022240: glom_rep2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 11.7 Mb)
Cell clustering results
Putative cell types Distal tubule cells, Intercalated cells, Podocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.