Kidney
SRA SRA662115
SRS SRS2998546
SRR SRR6782105,SRR6782106
Species Mus musculus
Sample (strain, genotype, etc.) CD1
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,541
Number of exp. genes 19,707 (median number of expressed genes per cell=885)
Number of clusters 5
Tissue Kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population Glomeruli
Metadata (raw) source_name=Drop-seq of whole isolated glomeruli|developmental stage=8 week old males|tissue type=dissociated glomerular cells|strain=CD1 IGS outbred|fixation=80% methanol/PBS|;GSM3022242: glom_rep4; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 8.8 Mb)
Cell clustering results
Putative cell types Distal tubule cells, Podocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.