Kidney
SRA SRA662115
SRS SRS2998547
SRR SRR6782103,SRR6782104
Species Mus musculus
Sample (strain, genotype, etc.) CD1
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,299
Number of exp. genes 19,541 (median number of expressed genes per cell=867)
Number of clusters 5
Tissue Kidney
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population Glomeruli
Metadata (raw) source_name=Drop-seq of whole isolated glomeruli|developmental stage=8 week old males|tissue type=dissociated glomerular cells|strain=CD1 IGS outbred|fixation=80% methanol/PBS|;GSM3022241: glom_rep3; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 7.7 Mb)
Cell clustering results
Putative cell types Distal tubule cells, Endothelial cells, Podocytes, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.