Subventricular zone
SRA SRA664819
SRS SRS3026284
SRR SRR6814853
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 857
Number of exp. genes 21,869 (median number of expressed genes per cell=875)
Number of clusters 10
Tissue Subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=adult subventricular zone|tissue=brain|brain region=subventricular zone, SVZ|fixation=80% Methanol/PBS|Sex=female|number of animals=5|mouse strain=C57BL/6N|genotype=wildtype|;GSM3032675: an002; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.