Subventricular zone
SRA SRA664819
SRS SRS3026286
SRR SRR6814858
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 1,150
Number of exp. genes 21,672 (median number of expressed genes per cell=985)
Number of clusters 13
Tissue Subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=adult subventricular zone|tissue=brain|brain region=subventricular zone, SVZ|fixation=none|Sex=male|number of animals=4|mouse strain=TCF/Lef_LacZ x Lrp2 <267> x FVBN|genotype=1 wildtype and 3 heterozygous littermate controls|;GSM3032680: an007_WT; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Ependymal cells, Epithelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.