Subventricular zone
SRA SRA664819
SRS SRS3026287
SRR SRR6814857
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 817
Number of exp. genes 20,719 (median number of expressed genes per cell=1019)
Number of clusters 7
Tissue Subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=adult subventricular zone|tissue=brain|brain region=subventricular zone, SVZ|fixation=none|Sex=mixed|number of animals=2 female, 2 male|mouse strain=C57BL/6N|genotype=wildtype|;GSM3032679: an009; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 4.7 Mb)
Cell clustering results
Putative cell types Astrocytes, Neuroendocrine cells, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.