Subventricular zone
SRA SRA664819
SRS SRS3026288
SRR SRR6814859
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol drop-seq
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,158
Number of exp. genes 21,172 (median number of expressed genes per cell=1069)
Number of clusters 10
Tissue Subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=adult subventricular zone|tissue=brain|brain region=subventricular zone, SVZ|fixation=none|Sex=male|number of animals=3|mouse strain=TCF/Lef_LacZ x Lrp2 <267> x FVBN|genotype=LRP2 knockout|;GSM3032681: an007_KO; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 6.9 Mb)
Cell clustering results
Putative cell types Astrocytes, Endothelial cells, Microglia, Neuroendocrine cells, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.