Subventricular zone
| SRA | SRA664819 |
| SRS | SRS3026289 |
| SRR | SRR6814860 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | drop-seq |
| Instrument | NextSeq 500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,003 |
| Number of exp. genes | 21,533 (median number of expressed genes per cell=974) |
| Number of clusters | 12 |
| Tissue | Subventricular zone |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=adult subventricular zone|tissue=brain|brain region=subventricular zone, SVZ|fixation=none|Sex=male|number of animals=4|mouse strain=TCF/Lef_LacZ x Lrp2 <267> x FVBN|genotype=2 wildtype and 2 heterozygous littermate controls|;GSM3032682: an010_WT; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Endothelial cells, Ependymal cells, Microglia, Neural stem/precursor cells, Neuroendocrine cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.