Cortical cells
SRA SRA666404
SRS SRS3040379
SRR SRR6831604
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 4,917
Number of exp. genes 28,367 (median number of expressed genes per cell=2693)
Number of clusters 17
Tissue Cortical cells
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Cortical cells|background strain=C57BL/6|age=E16.5|genotype=HET|;GSM3037799: HET [SAM24333406]; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 32.9 Mb)
Cell clustering results
Putative cell types Cajal-Retzius cells, Erythroid-like and erythroid precursor cells, Immature neurons, Macrophages, Pericytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.