Ventral striatum
SRA SRA667466
SRS SRS3059943
SRR SRR6854179
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 584
Number of exp. genes 18,598 (median number of expressed genes per cell=878)
Number of clusters 3
Tissue Ventral striatum
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad22, Ad23|age=p16, p24|sex=pooled male and female|tissue=StriatumVentral|cell_index=SI-3A-H11|BioSampleModel=Model organism or animal|
Gene search
Download Count matrix (raw read counts, R sparse data object, 3.7 Mb)
Cell clustering results
Putative cell types Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.