Dentate gyrus
SRA SRA667466
SRS SRS3059945
SRR SRR6854178
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 3,059
Number of exp. genes 25,082 (median number of expressed genes per cell=1245)
Number of clusters 11
Tissue Dentate gyrus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad22, Ad23|age=p16, p24|sex=pooled male and female|tissue=DentGyr|cell_index=SI-3A-H12|BioSampleModel=Model organism or animal|;RNA-Seq of mouse DentGyr
Gene search
Download Count matrix (raw read counts, R sparse data object, 11.6 Mb)
Cell clustering results
Putative cell types Astrocytes, Cajal-Retzius cells, Endothelial cells (brain), Interneurons, Microglia, Neurons, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.