SRA SRA667466
SRS SRS3059952
SRR SRR6854171
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,633
Number of exp. genes 22,339 (median number of expressed genes per cell=950)
Number of clusters 5
Tissue Thalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=missing|isolate=Ad37,Ad38|age=p21|sex=missing|tissue=Thalamus|cell_index=SI-3A-F1|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Thalamus
Gene search
Download Count matrix (raw read counts, R sparse data object, 6.6 Mb)
Cell clustering results
Putative cell types Endothelial cells (brain), Microglia, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.