SRA SRA667466
SRS SRS3059959
SRR SRR6854163
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,807
Number of exp. genes 22,473 (median number of expressed genes per cell=1017)
Number of clusters 10
Tissue Cerebellum
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad13|age=p25|sex=female|tissue=CB|cell_index=SI-3A-G5|BioSampleModel=Model organism or animal|;RNA-Seq of mouse CB
Gene search
Download Count matrix (raw read counts, R sparse data object, 14.3 Mb)
Cell clustering results
Putative cell types Astrocytes, Bergmann glia, Endothelial cells (brain), Erythroid-like and erythroid precursor cells, Microglia, Neuroblasts, Oligodendrocyte progenitor cells, Oligodendrocytes, Purkinje neurons, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.