Neo-cortex
SRA SRA667466
SRS SRS3059966
SRR SRR6854155
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,889
Number of exp. genes 22,339 (median number of expressed genes per cell=1176)
Number of clusters 8
Tissue Neo-cortex
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad18|age=p26|sex=female|tissue=Ctx2|cell_index=SI-3A-C11|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Ctx2
Gene search
Download Count matrix (raw read counts, R sparse data object, 13.5 Mb)
Cell clustering results
Putative cell types Endothelial cells (brain), GABAergic neurons, Interneurons, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.