Hippocampus (ca1)
| SRA | SRA667466 |
| SRS | SRS3059971 |
| SRR | SRR6854151 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 1,177 |
| Number of exp. genes | 23,612 (median number of expressed genes per cell=1180) |
| Number of clusters | 8 |
| Tissue | Hippocampus (ca1) |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | strain=vGat-tdTomato|isolate=CAint05, CAint06, CAint07|age=p27|sex=pooled male and female|tissue=CA1|cell_index=SI-3A-H11|BioSampleModel=Model organism or animal|;RNA-Seq of mouse CA1 |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Interneurons, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.