Hypothalamus
SRA SRA667466
SRS SRS3059981
SRR SRR6854141
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 2,375
Number of exp. genes 26,808 (median number of expressed genes per cell=1880)
Number of clusters 12
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad25|age=p19|sex=female|tissue=Hypothalamus|cell_index=SI-3A-C9|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Hypothalamus
Gene search
Download Count matrix (raw read counts, R sparse data object, 14.0 Mb)
Cell clustering results
Putative cell types Astrocytes, Endothelial cells (brain), Interneurons, Microglia, Neuroendocrine cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.