Spinal cord
| SRA | SRA667466 |
| SRS | SRS3059988 |
| SRR | SRR6854134 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Read length (bp) | |
| Single or paired-end | SINGLE |
| Full-length mRNA-seq | No |
| Number of cells | 6,423 |
| Number of exp. genes | 27,209 (median number of expressed genes per cell=1437) |
| Number of clusters | 17 |
| Tissue | Spinal cord |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | strain=Swiss|isolate=Ad27, Ad28|age=p21-23|sex=pooled male and female|tissue=SC|cell_index=SI-3A-D11|BioSampleModel=Model organism or animal|;RNA-Seq of mouse SC |
| Gene search |
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| Download |
Count matrix (raw read counts, R sparse data object, 24.6 Mb)
Cell clustering results |
| Putative cell types | Astrocytes, Endothelial cells (brain), Ependymal cells, Erythroid-like and erythroid precursor cells, Microglia, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.