Amygdala
SRA SRA667466
SRS SRS3060001
SRR SRR6854121
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 3,602
Number of exp. genes 26,840 (median number of expressed genes per cell=1505)
Number of clusters 12
Tissue Amygdala
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad24|age=p29|sex=female|tissue=Amygdala|cell_index=SI-3A-D8|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Amygdala
Gene search
Download Count matrix (raw read counts, R sparse data object, 16.4 Mb)
Cell clustering results
Putative cell types Astrocytes, Endothelial cells (brain), Interneurons, Microglia, Neurons, Oligodendrocytes, Purkinje neurons, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.