Dorsal midbrain
SRA SRA667466
SRS SRS3060008
SRR SRR6854114
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 5,241
Number of exp. genes 27,963 (median number of expressed genes per cell=1681)
Number of clusters 19
Tissue Dorsal midbrain
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad26|age=p20|sex=male|tissue=MidbrainDorsal|cell_index=SI-3A-B10|BioSampleModel=Model organism or animal|;RNA-Seq of mouse MidbrainDorsal
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Ependymal cells, Interneurons, Macrophages, Meningeal cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.