SRA SRA667466
SRS SRS3060010
SRR SRR6854112
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 5,842
Number of exp. genes 24,269 (median number of expressed genes per cell=1751)
Number of clusters 7
Tissue Mesencephalon?
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=mES|age=missing|sex=missing|tissue=mES|cell_index=SI-3A-E1|BioSampleModel=Model organism or animal|;RNA-Seq of mouse mES
Gene search
Download Count matrix (raw read counts, R sparse data object, 22.8 Mb)
Cell clustering results
Putative cell types Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.