Ventral midbrain
SRA SRA667466
SRS SRS3060012
SRR SRR6854110
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 5,313
Number of exp. genes 26,829 (median number of expressed genes per cell=1345)
Number of clusters 22
Tissue Ventral midbrain
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad26|age=p20|sex=male|tissue=MidbrainVentral|cell_index=SI-3A-F10|BioSampleModel=Model organism or animal|;RNA-Seq of mouse MidbrainVentral
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Putative cell types Astrocytes, Endothelial cells, Ependymal cells, Fibroblasts, Macrophages, Microglia, Neurons, Oligodendrocytes, Smooth muscle cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.