Cortex 1
SRA SRA667466
SRS SRS3060029
SRR SRR6854092
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 3,084
Number of exp. genes 25,077 (median number of expressed genes per cell=1583)
Number of clusters 15
Tissue Cortex 1
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad11|age=p23|sex=male|tissue=Ctx1|cell_index=SI-3A-E7|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Ctx1
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Interneurons, Macrophages, Microglia, Neurons, Oligodendrocytes, Purkinje neurons list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.