SRA SRA667466
SRS SRS3060034
SRR SRR6854090
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,233
Number of exp. genes 22,112 (median number of expressed genes per cell=994)
Number of clusters 3
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad06|age=p30|sex=male|tissue=Hypothalamus|cell_index=SI-3A-C1|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Hypothalamus
Gene search
Download Count matrix (raw read counts, R sparse data object, 7.9 Mb)
Cell clustering results
Putative cell types Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.