SRA SRA667466
SRS SRS3060038
SRR SRR6854082
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 571
Number of exp. genes 18,568 (median number of expressed genes per cell=963)
Number of clusters 3
Tissue Amygdala
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=Swiss|isolate=Ad33|age=p25-27|sex=male|tissue=Amygdala|cell_index=SI-3A-B12|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Amygdala
Gene search
Download Count matrix (raw read counts, R sparse data object, 4.9 Mb)
Cell clustering results
Putative cell types Interneurons, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.