SRA |
SRA667466 |
SRS |
SRS3060049 |
SRR |
SRR6854072 |
Species |
Mus musculus |
Sample (strain, genotype, etc.) |
|
Tumor |
|
Protocol |
10x chromium |
Instrument |
Illumina HiSeq 2500 |
Read length (bp) |
|
Single or paired-end |
SINGLE |
Full-length mRNA-seq |
No |
Number of cells |
5,624 |
Number of exp. genes |
26,606 (median number of expressed genes per cell=1042) |
Number of clusters |
23 |
Tissue |
Somatosensory cortex |
Cell line (Y/N) |
No |
Primary adult tissue (Y/N) |
No |
Target cell population |
|
Metadata (raw) |
strain=CD-1|isolate=Ad02|age=p29|sex=missing|tissue=SScortex|cell_index=SI-3A-B1|BioSampleModel=Model organism or animal|;RNA-Seq of mouse SScortex |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
|
Putative cell types |
Astrocytes, Endothelial cells, Interneurons, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Smooth muscle cells, Unknown
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|