Ventral midbrain
| SRA | SRA667466 |
| SRS | SRS3060050 |
| SRR | SRR6854073 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 3,460 |
| Number of exp. genes | 24,038 (median number of expressed genes per cell=1168) |
| Number of clusters | 12 |
| Tissue | Ventral midbrain |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | strain=Swiss|isolate=Ad33, Ad34|age=p25-27|sex=pooled male and female|tissue=MidbrainVentral|cell_index=SI-3A-B2|BioSampleModel=Model organism or animal|;RNA-Seq of mouse MidbrainVentral |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Endothelial cells, Ependymal cells, Macrophages, Microglia, Neurons, Oligodendrocytes, Smooth muscle cells list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.