SRA SRA667466
SRS SRS3060057
SRR SRR6854065
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 1,474
Number of exp. genes 21,836 (median number of expressed genes per cell=1048)
Number of clusters 3
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=missing|isolate=Ad36|age=p19|sex=missing|tissue=Hypothalamus|cell_index=SI-3A-A1|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Hypothalamus
Gene search
Download Count matrix (raw read counts, R sparse data object, 6.0 Mb)
Cell clustering results
Putative cell types Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.