Sympathetic nervous system
SRA SRA667466
SRS SRS3060058
SRR SRR6854063
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end SINGLE
Full-length mRNA-seq No
Number of cells 5,861
Number of exp. genes 25,902 (median number of expressed genes per cell=1078)
Number of clusters 18
Tissue Sympathetic nervous system
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) strain=CD-1|isolate=SYMP1|age=6w|sex=missing|tissue=Sympath|cell_index=SI-3A-A8|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Sympath
Gene search
Download Count matrix (raw read counts, R sparse data object, 60.7 Mb)
Cell clustering results
Putative cell types Endothelial cells, Endothelial cells (heart), Erythroid-like and erythroid precursor cells, Fibroblasts (lungs), Fibroblasts (pancreas), Macrophages, Schwann cells, Smooth muscle cells, Trigeminal neurons, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.