Thalamus
SRA SRA667466
SRS SRS3060059
SRR SRR6854064
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 5,074
Number of exp. genes 25,179 (median number of expressed genes per cell=1027)
Number of clusters 19
Tissue Thalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=Swiss|isolate=Ad33, Ad34|age=p25-27|sex=pooled male and female|tissue=Thalamus|cell_index=SI-3A-D2|BioSampleModel=Model organism or animal|;RNA-Seq of mouse Thalamus
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Choroid plexus cells, Endothelial cells, Ependymal cells, Interneurons, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown, Vascular smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.